SOM Bound to Realize Euclidean and Relational Outputs


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Documentation for package ‘SOMbrero’ version 0.2

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arth800 Time Series Expression Data for 800 Arabidopsis Thaliana Genes
arth800.expr Time Series Expression Data for 800 Arabidopsis Thaliana Genes
arth800.graph Time Series Expression Data for 800 Arabidopsis Thaliana Genes
initGrid Create an empty Self-Organizing Map structure
initSOM Initialize parameters for the SOM algorithm
plot.myGrid Draw a 'myGrid' class object
plot.somRes Draw a 'somRes' class object
predict.somRes Predict the classification of a new observation
print.myGrid Create an empty Self-Organizing Map structure
print.paramSOM Initialize parameters for the SOM algorithm
print.somRes Run the SOM algorithm
projectGraph Create a projected graph.
SOMbrero Self Organizing Maps Bound to Realize Euclidean and Relational Outputs
somRes.plotting Plotting 'somRes' results
summary.myGrid Create an empty Self-Organizing Map structure
summary.paramSOM Initialize parameters for the SOM algorithm
summary.somRes Run the SOM algorithm
trainSOM Run the SOM algorithm